GNU/Linux


Extend LVM space to the rest of the free space on the disk

Recently, we formatted a server with Ubuntu 22.04 LTS. While selecting the disk settings, we selected the encrypted LVM partition scheme, and even though we selected the whole disk, we did not notice that the LVM would only allocate, by default, 100GB out of the 600GB available on the raid volume.

So, we proceeded with the installation, and at some point, we noticed that we ran out of space which should not have happened.

Using the command df -h we quickly spotted the problem:

$ df -h
Filesystem                 Size  Used Avail Use% Mounted on
tmpfs                      3,2G  3,9M  3,2G   1% /run
/dev/mapper/vgubuntu-root  100G   83G   17G  83% /
tmpfs                       16G   40M   16G   1% /dev/shm
tmpfs                      5,0M  4,0K  5,0M   1% /run/lock
/dev/sda5                  703M  257M  395M  40% /boot
/dev/sda1                  511M   24K  511M   1% /boot/efi
tmpfs                       16G     0   16G   0% /run/qemu
tmpfs                      3,2G  156K  3,2G   1% /run/user/1000

/dev/mapper/vgubuntu-root was only 100GB instead of the 600GB that we would expect it to be.

Using the command vgdisplay we verified that the space allocated to the logical volume group was not what we wanted.

To fix the problem, we issued the following commands:

lvextend -l +100%FREE /dev/ubuntu-vg/ubuntu-lv;
resize2fs /dev/mapper/ubuntu--vg-ubuntu--lv;

lvextend instructed our logical volume to consume all the available space on the hosting disk.

Then resize2fs allocated all the available space to our partition.


How to mount a qcow2 disk image that does not contain an Ubuntu LVM installation

Mounting a qcow2 disk image on your host server can be accomplished with the help of this fast method. Thanks to this feature, it is possible to reset passwords, alter files, or recover data even while the virtual machine is not running. This specific method does not allow mounting disks with LVM as they are not properly recognized the volume group tools (e.g. vgdisplay).

Enable Network block device (NBD) module on the host

sudo modprobe nbd max_part=8;

Network block device, or NBD, is a protocol on Linux that the OS can use to forward a block device (usually a hard disk or partition) from one system to another. This can be accomplished by sending the block device over the network.
For instance, a hard disk drive attached to another computer may be accessed by a local machine that is part of the same network.

Connect the QCOW2 image as a network block device

sudo qemu-nbd --connect=/dev/nbd0 /var/lib/libvirt/images/miner.qcow2;
#Use QEMU Disk Network Block Device Utility

We used the above command to export the QEMU disk image (miner.qcow2) using the NBD protocol and connect it to the NBD device (/dev/nbd0).

Identify the available partitions.

Check if the device has a UUID of an LVM partition in the QCOW2 image

sudo lsblk -f /dev/nbd0;

The lsblk command will provide information about all available block devices or the ones you choose. To obtain information, the lsblk command reads the sysfs filesystem and the udev db. It then attempts to read LABELs, UUIDs, and filesystem types from the block device if the udev db is unavailable, or if lsblk was compiled without udev support. In this particular scenario, root rights are required. Sample output can be seen below:

NAME         FSTYPE      FSVER    LABEL UUID                                   FSAVAIL FSUSE% MOUNTPOINTS
nbd0                                                                                          
├─nbd0p1                                                                                      
├─nbd0p2                                                                                      
└─nbd0p3     LVM2_member LVM2 001       xniXr3-gWWj-xS0J-8TaT-EtDt-vZtR-92Z5ms                
  └─ubuntu--vg-ubuntu--lv
             ext4        1.0            be0a2dba-ac27-4dfd-9f90-60ae9196d5e6

Identify the virtual machine partitions

fdisk /dev/nbd0 -l;

fdisk is a program that is driven by dialog to create and manipulate partition tables. It can read GPT, MBR, Sun, SGI, and BSD partition tables. If no devices are specified, the operating system will use the devices listed in /proc/partitions (provided that this file already exists). Devices are always displayed in the order that they are specified on the command line or in the order that they are listed by the kernel in /proc/partitions, whichever comes first.

Mount the partition of the virtual machine

After you identify the partition that you need to mount, use the mount command to perform the action to a mounting point of your choosing.

#In this example, we assume that we want to mount nbd0p1 to /mnt/miner that we created.
sudo mkdir /mnt/miner/;
sudo mount /dev/nbd0p1 /mnt/miner/;

Upon successful execution, all the files of that partition will be available through our mounting point. If you try to mount an LVM partition, you will get the following error:

sudo mount /dev/nbd0p3 /mnt/miner/
mount: /mnt/miner: unknown filesystem type 'LVM2_member'.

In this tutorial, we do not handle this problem using this method. See below how we handled it using the guestfish tool.

Clean Up

After you are done, unmount, disconnect, and remove the NBD module if you do not plan on using it further.

#Unmount the partition
umount /mnt/miner/;
#Disconnect the image from the NBD device
qemu-nbd --disconnect /dev/nbd0;
#Unload the NBD module
rmmod nbd;

How to mount a qcow2 disk image that contains an Ubuntu LVM installation

In one case, we had an issue where we needed to mount a disk image of a VM that contained an LVN installation. The above solution did not work, as we could not access the LVM partitions properly. The volume group tools did not recognize the partitions as they were network block devices. To handle this scenario, we used guestfish.

Examining and altering the filesystems of virtual machines is possible with the help of the shell and command-line tool known as Guestfish. It uses libguestfs and makes all of the features of the guestfs API available. So, we installed guestfish straight from the repositories as follows:

sudo apt-get install guestfish;

Then, we connected to the image that contained the LVM installation as follows:

sudo guestfish --rw -a /var/lib/libvirt/images/miner.qcow2;

After connecting to the image, we executed the following:

  • run
    With run, we initiated the library and attached the disk image
  • list-filesystems
    We listed the file systems found by libguestfs
  • mount
    After identifying the partition we needed to mount, we used this command to assign it to the root path /
  • ls
    This command works as expected, we were able to list the files in various directories, etc.
  • edit
    We used edit to modify the file we needed to process
  • exit
    We used exit to terminate this session

Below is a sample example of our execution.

Welcome to guestfish, the guest filesystem shell for
editing virtual machine filesystems and disk images.

Type: ‘help’ for help on commands
      ‘man’ to read the manual
      ‘quit’ to quit the shell

><fs> run
 100% ⟦▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒▒⟧ 00:00
><fs>  list-filesystems
/dev/sda1: unknown
/dev/sda2: ext4
/dev/ubuntu-vg/ubuntu-lv: ext4
><fs> mount /dev/ubuntu-vg/ubuntu-lv /
><fs> ls /home
tux
bob
><fs> edit /etc/default/grub

Using a CSV input file, find all documents that contain any of the items in a cell of a column

The following code will use as input one column from a CSV file, and for each element in the column, it will perform a full-text search in a folder to find all files that contain that element.

#!/bin/bash

#Execution parameters
# 1 - the folder to look in for the element
# 2 - the input file that contains the search terms
# 3 - the column of interest
# 4 - the delimiter to use to find the column
# e.g. ./searchEachElement.sh ./2\ Print/ book.csv 5 ','

folder="$1";
input="$2";
column="$3";
delimiter="$4"

while read -r line; do
  needle=`echo $line | cut -d "$delimiter" -f "$column"`; 
  echo ">>> $needle"
  find "$folder" -type f -exec grep "$needle" -s -l '{}' \;
done < "$input";

More information on the full-text search can be found here.